fixed merge conflict with schema.rb

fixed merge conflict in schema.rb

Updated Gemfile to use Rails 4.2.7, fixed some minor issues with locale initializer (#21) ...

* Migrated codebase from rails 4.0 to 4.2, also removed most of the version specifications from the gem dependencies and ran bundle update

* Commented out api test since it is incomplete and references a missing fixture. Also commented out stubbed performance test because that functionality is no longer a part of rails

* renamed config/environment to config/environments which is what rails is looking for. Commented out the DOCX mime type reference because it is already added by rails. Commented out the belongs_to_and has_many line in models/user because it is already defined by rolify gem

* updated ruby version to 2.1.10 for devise gem

* Added line to have tests auto-run db:migrate

* Ran db:migrate to update the schema since there were some pending migrations preventing travis from running rake

* removed schem_migration line from test_helper as it did not seem to help with the schema migration issue in travis

* Added fb:migrate and db:test:prepare commands to travis file

* replaced deprecated ActiveRecord::Migrator call in old db migration file

* Removed rake db tasks from travis file now that the offending migration script has been fixed

* added rake db:test:prepare back to travis file and added call to run default test task

* Updated find_by_all to the newer and more accepted 'where'

* Updated routes.rb to remove unecessary create and edit route definitions

* Fixed stack too deep error by commenting out circular reference to sections in the version model. Changed deprecated '.find(:all, :order => 'field ASC')' format to '.all.order('field')'

* removed redundant bootstrap file. using bootstrap.min.js going forward. updated css to default align all text to left

* Added js preventDefault to modal popup functions to prevent them from appearing and immediately disappering

* Replaced deprecated link_to_function. the call in the helpers/application.rb should eventually be rethought. We shouldn't be using the onclick function of an html element directly, we should use the jquery approach: .click()

* removed deprecated link_to_object function from helpers/application.rb and added client side js script to add new options to a question.

* Upgraded select2 js file

* Removed all accepts_nested_attributes_for for belongs_to associations because they were creating circular calls in ActiveRecord.

* Fixed add/remove option js

* Fixed i18n calls in erb files that were missing an equal sign (e.g. <% t('value'') %> --> <%= t('value') %> so that the value will appear to the user. Also updated i18n calls from admin.js with 'js.' prefix)

* Removed deprecated uniq_by call on ActiveRecord collection

* Updated textbox and textarea sizes on contact_us form. added a route for the 'future plans' page

* Added 'self' prefix to dmptemplate references in models/project.rb because of a scoping issue. tweaks to select2 dropdowns on create project page

* Moved i18n calls out of string content in toolbar.js

* Removed outdated i%() array initializers because they now create arrays of symbols instead of strings

* Fixes to the plan settings page

* Fixed issues with settings hash

* Removed some debug statements

* Added the new rails 4.2 byebug gem

* added rails 4 bin

* added rails 4 bin

* tweaks to env and session_store cookie domain

* Updated routes to make lock/unlock paths use json by default

* updated routes for lock/unlock section on plan form

* fixed issue with lock/unlock using .json extension in ajax call. fixed unknown i18n references in plans.js

* Fixed issue with location of web-console in the Gemfile.

* Updated static page links so that they use localized paths. Added new locized_routes flag to the contact-us initializer and upgraded its gem

* Updated gemfile to specify specific version of contact-us

* Added some bug fixes that were a part of an old 'upgrade-bootstrap' branch but were missed when creating the rails-4-2 pull request. Also replaces the static page urls with localized versions

* removed console.log debug statements

* Organized locale files for dependencies into subdirectories

* Added localization files for the contact-us gem

* Updated load path on locales initializer so that it understands subdirectories. separated en contact-us locale into en-Uk and en-US. updated contact_us page to use gem's built in localization files

* Switched the dmptool to use en-US localization

* updated en-UK and en-US locale files to make sure that they use their respective locale ids instead of en. Added a branding yaml file for org and app names

* Change name of the application's root module from DMPonline4 to DMPRoadmap

* Began removing branding variables from the locales file and placed them in branding.yml

* finished initial branding of static pages

* Created DMPRoadmap logo and swapped out JISC logo for UC3 logo.

* commented out version specification in Gemfile for the contact-us gem

* Capified the application

* configuring capistrano

* Updated the contact_us gem version for localized paths

* capistrano config

* updated contact_us gem version

* changed server connection methodology

* removed Gemfile.lock, contact_us initializer, and /config/environments files from gitignore

* added initializers that were previsouly ignored by gitignore

* Changed DMPonline references to DMPRoadmap

* removed web_console reference in config/environments/development.rb because it is causing issues with capistrano deploy and does not seem to be needed

* removed web_console from gemfile because its causing deployment issues

* trying to remove web_console

* Revert "trying to remove web_console"

This reverts commit 7a1b714.

* Revert "removed web_console from gemfile because its causing deployment issues"

This reverts commit f8f8316.

* removed Gemfile.lock from .gitignore

* Updated config.ru to newer rails style

* tweaked deploy script

* added phusion passenger start/stop to deploy.rb

* Added passenger to gemfile

* Added passenger to gemfile

* tweaks to cap deploy.rb

* Changed staging.rb to stage.rb for capistrrano

* commented out line in config.ru

* commented out line in config.ru

* Removed capistrano deployment files

* Removed capfile

* reran bundle install to build Gemfile.lock

* Updated version of ruby to 2.2.2 in travis

* rebuilt db schema

* added length specification to a few indexes that are causing travis mysql db setup issues

* Switched travis to use mysql 5.6

* Switched travis to use mysql 5.6 and added params to create table to allow for >767 bytes indexes

* removed mysql 5.6 specifications form travis file. added limits to size of friendly_id_slugs index

* removed mysql 5.6 specifications form travis file. added limits to size of friendly_id_slugs index

* fixed merge conflict in .travis file

* Updated gemfile to specify >= ruby 2.2.2. Updated Rails to the latest version due to an XSS vulnerability. updated locale initializer to handle migration issue where it was checking default_location in langauges table before the column exists. Also added check for instances where no default langauge is specified. Rebuilt schema.rb. Fixed issue with seeds.rb reported by Weiwei

* Added languages to the seeds.rb file

* Fixed syntax error in environments/test.rb created during merge conflict resolution

Merging master (#20) ...

* added data structures for testing

* renamed token_permission_type to plural to follow convention of fixtures

* added gem to allow testing of controllers

* began implimenting testing for projects controller

* fixed auth to reject empty string

* added data structures for testing

* added data structures for testing

* removed old unnecissary data structures from fixtures

* added forgotten view for org-admins giving user's api permissions

* updated .gitignore

* added gem to allow testing of controllers

* began implimenting testing for projects controller

* fixed auth to reject empty string

* added data structures for testing

* added data structures for testing

* removed old unnecissary data structures from fixtures

* added forgotten view for org-admins giving user's api permissions

* updated .gitignore

* fixed leftover merge conflict in .gitignore

* updated org-admin view of users for rails 4.2 compatability

* fiexed a bug where user's api token permissions wouldnt display

* fixed syntax error

* changed guidance_group to guidance_groups for consistancy with api spec

* fix roadmap route

* bugfixing auth for api

* removed token_permission as it was accidentially re-added by a merge

* added gem to allow testing of controllers

* began implimenting testing for projects controller

* fixed auth to reject empty string

* added data structures for testing

* added data structures for testing

* removed old unnecissary data structures from fixtures

* added forgotten view for org-admins giving user's api permissions

* updated .gitignore

* removed old unnecissary data structures from fixtures

* updated .gitignore

* updated org-admin view of users for rails 4.2 compatability

* fiexed a bug where user's api token permissions wouldnt display

* fixed syntax error

* changed guidance_group to guidance_groups for consistancy with api spec

* bugfixing auth for api

* modified schema

* removed admin interface to token_permission, another forgotten side-effect

* removed admin interface to token_permission, another forgotten side-effect

* modified return structure of guidance_groups API to reflect current spec

* removed guidances api endpoint as no longer necissary

* added templates api endpoint

* commit

* commit

* initial commit of untested statistics API

* updated Statistics API and added bugfixes

* added aditional seeds for api token_permission_types

* added docs for stats api, also passing tests

* added fucntionality to give org_admin priveleges through the org_admin interface

* corrected statistics API to handle null dates and filter projects correctly

* addedrestriction that users must be confirmed to be counted by stats api

* added documentation to dmptemplates api controller

* added org_id field to plans metadata as a returned plan can belong to somebody else's organisation

* initial passover of removing magic strings

* added comment to I18n_constant and fixed missing magic string

* fixed the magic strings function

* removed duplicate gem from gemfile

* migrations and routes tests

* changed gem dependancies and fixed syntax bug

* fixed bug where show plans view only displayed first letter of columns

* aliased

* added documentation to organisation, phase, and part of plans

* added documentation to organisation, phase, and part of plans

* added documentation to model for plan

* added documentation to project model

* added documentation to project_group model

*  added documentation to remaining models

* fixed admin logout bug

*  removed hard-coded references to DCC

* fixed bug in dmptemplate with magicstrings

* dropdown and org language setting

* test

* commit

* migrations and routes tests

* aliased

* dropdown and org language setting

* test

* remove typo

* fixed parentheses bug in api/projects_controller

* fix

* merging

* remove git merge conflicts artifacts

* added gemfile, environments, and an initaliser to allow merge

* fix locales picking

* super_admin area for languages, changes to langauge initializer to fix migrations issue and org language priority in user language picking

* add association between organisation and language

allow org admin to upload logo through admin UI

Replacing remaining DMPonline references with DMPRoadmap (#15) ...

* Migrated codebase from rails 4.0 to 4.2, also removed most of the version specifications from the gem dependencies and ran bundle update

* Commented out api test since it is incomplete and references a missing fixture. Also commented out stubbed performance test because that functionality is no longer a part of rails

* renamed config/environment to config/environments which is what rails is looking for. Commented out the DOCX mime type reference because it is already added by rails. Commented out the belongs_to_and has_many line in models/user because it is already defined by rolify gem

* updated ruby version to 2.1.10 for devise gem

* Added line to have tests auto-run db:migrate

* Ran db:migrate to update the schema since there were some pending migrations preventing travis from running rake

* removed schem_migration line from test_helper as it did not seem to help with the schema migration issue in travis

* Added fb:migrate and db:test:prepare commands to travis file

* replaced deprecated ActiveRecord::Migrator call in old db migration file

* Removed rake db tasks from travis file now that the offending migration script has been fixed

* added rake db:test:prepare back to travis file and added call to run default test task

* Updated find_by_all to the newer and more accepted 'where'

* Updated routes.rb to remove unecessary create and edit route definitions

* Fixed stack too deep error by commenting out circular reference to sections in the version model. Changed deprecated '.find(:all, :order => 'field ASC')' format to '.all.order('field')'

* removed redundant bootstrap file. using bootstrap.min.js going forward. updated css to default align all text to left

* Added js preventDefault to modal popup functions to prevent them from appearing and immediately disappering

* Replaced deprecated link_to_function. the call in the helpers/application.rb should eventually be rethought. We shouldn't be using the onclick function of an html element directly, we should use the jquery approach: .click()

* removed deprecated link_to_object function from helpers/application.rb and added client side js script to add new options to a question.

* Upgraded select2 js file

* Removed all accepts_nested_attributes_for for belongs_to associations because they were creating circular calls in ActiveRecord.

* Fixed add/remove option js

* Fixed i18n calls in erb files that were missing an equal sign (e.g. <% t('value'') %> --> <%= t('value') %> so that the value will appear to the user. Also updated i18n calls from admin.js with 'js.' prefix)

* Removed deprecated uniq_by call on ActiveRecord collection

* Updated textbox and textarea sizes on contact_us form. added a route for the 'future plans' page

* Added 'self' prefix to dmptemplate references in models/project.rb because of a scoping issue. tweaks to select2 dropdowns on create project page

* Moved i18n calls out of string content in toolbar.js

* Removed outdated i%() array initializers because they now create arrays of symbols instead of strings

* Fixes to the plan settings page

* Fixed issues with settings hash

* Removed some debug statements

* Added the new rails 4.2 byebug gem

* added rails 4 bin

* added rails 4 bin

* tweaks to env and session_store cookie domain

* Updated routes to make lock/unlock paths use json by default

* updated routes for lock/unlock section on plan form

* fixed issue with lock/unlock using .json extension in ajax call. fixed unknown i18n references in plans.js

* Fixed issue with location of web-console in the Gemfile.

* Updated static page links so that they use localized paths. Added new locized_routes flag to the contact-us initializer and upgraded its gem

* Updated gemfile to specify specific version of contact-us

* Added some bug fixes that were a part of an old 'upgrade-bootstrap' branch but were missed when creating the rails-4-2 pull request. Also replaces the static page urls with localized versions

* removed console.log debug statements

* Organized locale files for dependencies into subdirectories

* Added localization files for the contact-us gem

* Updated load path on locales initializer so that it understands subdirectories. separated en contact-us locale into en-Uk and en-US. updated contact_us page to use gem's built in localization files

* updated en-UK and en-US locale files to make sure that they use their respective locale ids instead of en. Added a branding yaml file for org and app names

* Change name of the application's root module from DMPonline4 to DMPRoadmap

* Began removing branding variables from the locales file and placed them in branding.yml

* finished initial branding of static pages

* Created DMPRoadmap logo and swapped out JISC logo for UC3 logo.

* commented out version specification in Gemfile for the contact-us gem

* Updated the contact_us gem version for localized paths

* updated contact_us gem version

* removed Gemfile.lock, contact_us initializer, and /config/environments files from gitignore

* added initializers that were previsouly ignored by gitignore

* Changed DMPonline references to DMPRoadmap

Added in missing bug fixes (#13) ...

* Migrated codebase from rails 4.0 to 4.2, also removed most of the version specifications from the gem dependencies and ran bundle update

* Commented out api test since it is incomplete and references a missing fixture. Also commented out stubbed performance test because that functionality is no longer a part of rails

* renamed config/environment to config/environments which is what rails is looking for. Commented out the DOCX mime type reference because it is already added by rails. Commented out the belongs_to_and has_many line in models/user because it is already defined by rolify gem

* updated ruby version to 2.1.10 for devise gem

* Added line to have tests auto-run db:migrate

* Ran db:migrate to update the schema since there were some pending migrations preventing travis from running rake

* removed schem_migration line from test_helper as it did not seem to help with the schema migration issue in travis

* Added fb:migrate and db:test:prepare commands to travis file

* replaced deprecated ActiveRecord::Migrator call in old db migration file

* Removed rake db tasks from travis file now that the offending migration script has been fixed

* added rake db:test:prepare back to travis file and added call to run default test task

* Updated find_by_all to the newer and more accepted 'where'

* Updated routes.rb to remove unecessary create and edit route definitions

* Fixed stack too deep error by commenting out circular reference to sections in the version model. Changed deprecated '.find(:all, :order => 'field ASC')' format to '.all.order('field')'

* removed redundant bootstrap file. using bootstrap.min.js going forward. updated css to default align all text to left

* Added js preventDefault to modal popup functions to prevent them from appearing and immediately disappering

* Replaced deprecated link_to_function. the call in the helpers/application.rb should eventually be rethought. We shouldn't be using the onclick function of an html element directly, we should use the jquery approach: .click()

* removed deprecated link_to_object function from helpers/application.rb and added client side js script to add new options to a question.

* Upgraded select2 js file

* Removed all accepts_nested_attributes_for for belongs_to associations because they were creating circular calls in ActiveRecord.

* Fixed add/remove option js

* Fixed i18n calls in erb files that were missing an equal sign (e.g. <% t('value'') %> --> <%= t('value') %> so that the value will appear to the user. Also updated i18n calls from admin.js with 'js.' prefix)

* Removed deprecated uniq_by call on ActiveRecord collection

* Updated textbox and textarea sizes on contact_us form. added a route for the 'future plans' page

* Added 'self' prefix to dmptemplate references in models/project.rb because of a scoping issue. tweaks to select2 dropdowns on create project page

* Moved i18n calls out of string content in toolbar.js

* Removed outdated i%() array initializers because they now create arrays of symbols instead of strings

* Fixes to the plan settings page

* Fixed issues with settings hash

* Removed some debug statements

* Added the new rails 4.2 byebug gem

* added rails 4 bin

* added rails 4 bin

* tweaks to env and session_store cookie domain

* Updated routes to make lock/unlock paths use json by default

* updated routes for lock/unlock section on plan form

* fixed issue with lock/unlock using .json extension in ajax call. fixed unknown i18n references in plans.js

* Fixed issue with location of web-console in the Gemfile.

* Updated static page links so that they use localized paths. Added new locized_routes flag to the contact-us initializer and upgraded its gem

* Updated gemfile to specify specific version of contact-us

* Added some bug fixes that were a part of an old 'upgrade-bootstrap' branch but were missed when creating the rails-4-2 pull request. Also replaces the static page urls with localized versions

* removed console.log debug statements

Sam's fix for the API token issue (#11) ...

* added data structures for testing

* renamed token_permission_type to plural to follow convention of fixtures

* added gem to allow testing of controllers

* began implimenting testing for projects controller

* fixed auth to reject empty string

* added data structures for testing

* added data structures for testing

* removed old unnecissary data structures from fixtures

* added forgotten view for org-admins giving user's api permissions

* updated .gitignore

* added gem to allow testing of controllers

* began implimenting testing for projects controller

* fixed auth to reject empty string

* added data structures for testing

* added data structures for testing

* removed old unnecissary data structures from fixtures

* added forgotten view for org-admins giving user's api permissions

* updated .gitignore

* fixed leftover merge conflict in .gitignore

* updated org-admin view of users for rails 4.2 compatability

* fiexed a bug where user's api token permissions wouldnt display

* fixed syntax error

* changed guidance_group to guidance_groups for consistancy with api spec

* fix roadmap route

* bugfixing auth for api

* removed token_permission as it was accidentially re-added by a merge

* added gem to allow testing of controllers

* began implimenting testing for projects controller

* fixed auth to reject empty string

* added data structures for testing

* added data structures for testing

* removed old unnecissary data structures from fixtures

* added forgotten view for org-admins giving user's api permissions

* updated .gitignore

* removed old unnecissary data structures from fixtures

* updated .gitignore

* updated org-admin view of users for rails 4.2 compatability

* fiexed a bug where user's api token permissions wouldnt display

* fixed syntax error

* changed guidance_group to guidance_groups for consistancy with api spec

* bugfixing auth for api

* modified schema

* removed admin interface to token_permission, another forgotten side-effect

* removed admin interface to token_permission, another forgotten side-effect

Rails 4.2 (#10) ...

* Migrated codebase from rails 4.0 to 4.2, also removed most of the version specifications from the gem dependencies and ran bundle update

* Commented out api test since it is incomplete and references a missing fixture. Also commented out stubbed performance test because that functionality is no longer a part of rails

* renamed config/environment to config/environments which is what rails is looking for. Commented out the DOCX mime type reference because it is already added by rails. Commented out the belongs_to_and has_many line in models/user because it is already defined by rolify gem

* updated ruby version to 2.1.10 for devise gem

* Added line to have tests auto-run db:migrate

* Ran db:migrate to update the schema since there were some pending migrations preventing travis from running rake

* removed schem_migration line from test_helper as it did not seem to help with the schema migration issue in travis

* Added fb:migrate and db:test:prepare commands to travis file

* replaced deprecated ActiveRecord::Migrator call in old db migration file

* Removed rake db tasks from travis file now that the offending migration script has been fixed

* added rake db:test:prepare back to travis file and added call to run default test task

* Updated find_by_all to the newer and more accepted 'where'

* Updated routes.rb to remove unecessary create and edit route definitions

* Fixed stack too deep error by commenting out circular reference to sections in the version model. Changed deprecated '.find(:all, :order => 'field ASC')' format to '.all.order('field')'

* removed redundant bootstrap file. using bootstrap.min.js going forward. updated css to default align all text to left

* Added js preventDefault to modal popup functions to prevent them from appearing and immediately disappering

* Replaced deprecated link_to_function. the call in the helpers/application.rb should eventually be rethought. We shouldn't be using the onclick function of an html element directly, we should use the jquery approach: .click()

* removed deprecated link_to_object function from helpers/application.rb and added client side js script to add new options to a question.

* Upgraded select2 js file

* Removed all accepts_nested_attributes_for for belongs_to associations because they were creating circular calls in ActiveRecord.

* Fixed add/remove option js

* Fixed i18n calls in erb files that were missing an equal sign (e.g. <% t('value'') %> --> <%= t('value') %> so that the value will appear to the user. Also updated i18n calls from admin.js with 'js.' prefix)

* Removed deprecated uniq_by call on ActiveRecord collection

* Updated textbox and textarea sizes on contact_us form. added a route for the 'future plans' page

* Added 'self' prefix to dmptemplate references in models/project.rb because of a scoping issue. tweaks to select2 dropdowns on create project page

* Moved i18n calls out of string content in toolbar.js

* Removed outdated i%() array initializers because they now create arrays of symbols instead of strings

* Fixes to the plan settings page

* Fixed issues with settings hash

* Removed some debug statements

* Added the new rails 4.2 byebug gem

* added rails 4 bin

* added rails 4 bin

* tweaks to env and session_store cookie domain

* Updated routes to make lock/unlock paths use json by default

* updated routes for lock/unlock section on plan form

* fixed issue with lock/unlock using .json extension in ajax call. fixed unknown i18n references in plans.js

* Fixed issue with location of web-console in the Gemfile.

Merged conflicts

merge

localization based on url

final commit before merging into master

added view for token_permission_types

added a page for users to view api endpoint information

updated logic for token removal/generation

controller now depricated

added way to define users api-tokens through users controller

localization further work, including dropdown initial work

comment for clarity

re-wrote authentication to ignore empty string tokens

changed can_view to can_view? for consistency

updated call for can_view to can_view?

standardised errors in api controllers

adding standardised errors to locales

added parsing of guidances to projects api ...

-Added parsing of the guidance param in the JSON

Master (#7) ...

* Update license (merging Marta's change that added Univ. of Glasgow to the text)

Update license to include University of Glasgow.

* Added API and Localisation work

API development done by Sam Rust - xsrust
Localisation work done by Damodar Sojka - DamodarSojka

Added API and Localisation work ...

API development done by Sam Rust - xsrust
Localisation work done by Damodar Sojka - DamodarSojka

DMPonline4 - RAILS 4.0 (#4) ...

Merging the initial DMPOnline4 codebase into Roadmap

DMPonline4, this code was designed and implemented by the Digital
Curation Centre (DCC)
DMPonline runs in Ruby 2.1 and Rails 4.0, there is a mysql database.