<?xml version="1.0"?> <!DOCTYPE catalog PUBLIC "-//OASIS//DTD Entity Resolution XML Catalog V2.3//EN" "http://www.oasis-open.org/committees/entity/release/1.0/catalog.dtd"> <catalog xmlns="urn:oasis:names:tc:entity:xmlns:xml:catalog" prefer="public"> <!-- ============================================================= --> <!-- MODULE: An OASIS XML Catalog (not a DTD Suite module) --> <!-- VERSION: 2.3 --> <!-- DATE: February 2007 --> <!-- --> <!-- ============================================================= --> <!-- ============================================================= --> <!-- SYSTEM: Archiving and Interchange DTD Suite --> <!-- --> <!-- PURPOSE: To make the connection between PUBLIC identifiers --> <!-- for DTD Suite modules and their URIs --> <!-- --> <!-- CONTAINS: 1) Scope of Catalog --> <!-- 2) Catalog organization comment --> <!-- 3) How to set up a catalog --> <!-- 4) PUBLIC/SYSTEM identifier map --> <!-- a. NLM Journal Publishing DTD (Blue) --> <!-- b. NLM Journal Archiving and Interchange --> <!-- DTD (Green) --> <!-- c. NLM Journal Authoring DTD (Pumpkin) --> <!-- d. NLM Book DTD (Purple: includes Book --> <!-- Collection DTD and Historical Book DTD) --> <!-- e. Archiving and Interchange DTD Suite --> <!-- common (shared) modules --> <!-- f. Suite common (shared) modules from --> <!-- external sources (table models, --> <!-- general entity sets, etc.) --> <!-- --> <!-- CREATED FOR: --> <!-- Digital Archive of Journal Articles --> <!-- National Center for Biotechnology Information --> <!-- (NCBI) --> <!-- National Library of Medicine (NLM) --> <!-- --> <!-- ORIGINAL CREATION DATE: --> <!-- June 2002 --> <!-- --> <!-- Suggestions for refinements and enhancements to --> <!-- this DTD should be sent in email to: --> <!-- archive-dtd@ncbi.nlm.nih.gov --> <!-- ============================================================= --> <!-- ============================================================= --> <!-- DTD VERSION/CHANGE HISTORY --> <!-- ============================================================= --> <!-- ============================================================= Version Reason/Occasion (who) vx.x (yyyy-mm-dd) ============================================================= Version 2.3 (DAL/BTU) v2.3 (2007-02-02) Enhancement Release (2.3) following the Working Group meetings of Oct-Nov/2006-Jan/2007. No backward-incompatible changes. Archiving loosened even more. New structures for all the DTDs. Big catalog change = all modules updated to version 2.3 5. Updated public identifiers of the all modules to February 2007 "v2.3 20070202" ============================================================= Version 2.2 (DAL/BTU) v2.2 (2006-10-13) Backwards-compatible changes to meet operational needs. Typical changes include adding attribute values and making required elements optional. 4. Updated public identifiers of the Book DTD, the Book Collection DTD, the Historical Book DTD, and book-related modules (excepting historical book modules) from "v2.1 20050630" to "v2.2 20061013" ============================================================= Version 2.2 (DAL/BTU) v2.2 (2006-04-30) Backwards-compatible changes to meet operational needs. Typical changes include adding attribute values and making required elements optional. 3. Updated public identifiers of changed modules to new version number "v2.2 20060430//EN" ============================================================= Version 2.1 (DAL/BTU) v2.1 (2005-12-05) CATALOG-ONLY CHANGES 2. Renamed "ISOlat" files to "isolat" to match existing filenames 1. Closed unclosed comments and added initial comment --> <!-- ============================================================== --> <!-- SCOPE (Suite Version 2.3) --> <!-- ============================================================== --> <!-- This catalog is made up of several groups, each with its own xml:base attribute, for: - NLM Journal Publishing DTD (Blue) - NLM Journal Archiving and Interchange DTD (Green) - NLM Journal Authoring DTD (Pumpkin) - NLM Book DTD (Purple: includes Book Collection DTD and Historical Book DTD) - Archiving and Interchange DTD Suite common (shared) modules - Suite common (shared) modules from external sources (table models, general entity sets, etc.) --> <!-- ============================================================== --> <!-- CATALOG ORGANIZATION --> <!-- ============================================================== --> <!-- GROUPS AND ENTRIES Entries are grouped into logical clusters, organized by the particular DTD variant. Each catalog entry associates a PUBLIC identifier with a SYSTEM identifier. The SYSTEM identifier is resolved with respect to the xml:base attribute which is set on the group element. Thus, for example: xml:base="file:///C:/Work/Tasks/DTDJournal/" + uri="journalpublishing.dtd" = file:///C:/Work/Tasks/DTDJournal/journalpublishing.dtd The XML looks like this: <group xml:base="file:///C:/Work/Tasks/DTDJournal/"> <public publicId="-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" uri="journalpublishing.dtd"/> ... </group> --> <!-- ============================================================== --> <!-- HOW TO SET UP --> <!-- ============================================================== --> <!-- The OASIS catalog and the NCBI Suite of Modules provide a wide range of flexibility for setting up. Here are two easy ways to do it: 1. WITHOUT an OASIS catalog (DTD components on a local system): - unzip the DTD packages you want to use into a single directory: - the journal-publishing package - the archive article package - the journal-authoring package - the book package - create your own DTD customization, if you need to, anywhere, using local (relative or absolute) SYSTEM identifiers to reference DTD modules. - create a document instance anywhere, and point its SYSTEM identifier to your customized DTD or to the package DTD you have chosen to use, using a local (relative or absolute) SYSTEM identifier. The SYSTEM identifiers used in the DTD modules are relative to the directory in which you have placed the DTD package and your customized DTD, and so your editor/processor will find them when reading the DTD. 2. WITH this OASIS catalog (DTD components on a local system): - unzip the DTD packages you want to use into a single directory, or into separate directories. - in this file (the catalog), edit the xml:base attribute on the <group> elements. Here are instructions for the two most likely configurations: - if you have unzipped only one of the DTD packages (journal, archive article, journal-authoring, or book): - set the xml:base attribute on the corresponding <group> element in this catalog to the directory where you put the unzipped components, - AND set the xml:base attribute on the last two groups in this catalog (the modular library and the public models) to that same directory. - if you have unzipped more than one DTD package into a single directory: - set all xml:base attributes to that directory. - create your own DTD customization, if you need to, anywhere, using PUBLIC identifiers to reference the DTD modules. - tell your editor/processor about this OASIS catalog (NB: many apps must be closed and relaunched when a catalog file is first specified AND when it is changed) - create a document instance anywhere, and point its SYSTEM identifier to the DTD you want to use, giving an absolute or relative SYSTEM path. Your editor/processor will map the PUBLIC identifiers in the DTD to the SYSTEM identifiers specified in this catalog, using xml:base to locate their whereabouts. --> <!-- ============================================================== --> <!-- PUBLIC-SYSTEM IDENTIFIER MAP --> <!-- ============================================================== --> <!-- ============================================================== --> <!-- JOURNAL PUBLISHING DTD (BLUE) --> <!-- ============================================================== --> <group xml:base="file:///C:/Work/Tasks/DTDJournal/" prefer="public"> <public publicId="-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" uri="journalpublishing.dtd"/> <public publicId="-//NLM//DTD Journal Publishing DTD-Specific Modules v2.3 20070202//EN" uri="journalpubcustom-modules.ent"/> <public publicId="-//NLM//DTD Journal Publishing DTD Customize Classes Module v2.3 20070202//EN" uri="journalpubcustom-classes.ent"/> <public publicId="-//NLM//DTD Journal Publishing DTD Customize Mixes Module v2.3 20070202//EN" uri="journalpubcustom-mixes.ent"/> <public publicId="-//NLM//DTD Journal Publishing DTD Customize Content and Attributes Module v2.3 20070202//EN" uri="journalpubcustom-models.ent"/> <public publicId="-//NLM//DTD NLM Citation v2.3 20070202//EN" uri="nlmcitation.ent"/> </group> <!-- ============================================================== --> <!-- JOURNAL ARTICLE ARCHIVING DTD (GREEN) --> <!-- ============================================================== --> <group xml:base="file:///C:/Work/Tasks/DTDArchiving/" prefer="public"> <public publicId="-//NLM//DTD Journal Archiving and Interchange DTD v2.3 20070202//EN" uri="archivearticle.dtd"/> <public publicId="-//NLM//DTD Journal Archiving DTD-Specific Modules v2.3 20070202//EN" uri="archivecustom-modules.ent"/> <public publicId="-//NLM//DTD Journal Archiving DTD Customize Classes Module v2.3 20070202//EN" uri="archivecustom-classes.ent"/> <public publicId="-//NLM//DTD Journal Archiving DTD Customize Mixes Module v2.3 20070202//EN" uri="archivecustom-mixes.ent"/> <public publicId="-//NLM//DTD Journal Archiving DTD Customize Content and Attributes Module v2.3 20070202//EN" uri="archivecustom-models.ent"/> </group> <!-- ============================================================== --> <!-- JOURNAL ARTICLE AUTHORING DTD (PUMPKIN) --> <!-- ============================================================== --> <group xml:base="file:///C:/Work/Tasks/DTDAuthoring/" prefer="public"> <public publicId="-//NLM//DTD Article Authoring DTD v2.3 20070202//EN" uri="articleauthoring.dtd"/> <public publicId= "-//NLM//DTD Article Authoring DTD-Specific Modules v2.3 20070202//EN" uri="articleauthcustom-modules.ent"/> <public publicId= "-//NLM//DTD Article Authoring DTD Over-ride Classes Module v2.3 20070202//EN" uri="articleauthcustom-classes.ent"/> <public publicId= "-//NLM//DTD Article Authoring DTD Over-ride Mixes Module v2.3 20070202//EN" uri="articleauthcustom-mixes.ent"/> <public publicId= "-//NLM//DTD Article Authoring DTD Over-ride Content and Attribute Module v2.3 20070202//EN" uri="articleauthcustom-models.ent"/> </group> <!-- ============================================================== --> <!-- NCBI BOOK DTDS (PURPLE) --> <!-- ============================================================== --> <group xml:base="file:///C:/Work/Tasks/DTDBook/" prefer="public"> <!-- .............................................................. --> <!-- NCBI BOOK DTD --> <!-- .............................................................. --> <public publicId="-//NLM//DTD Book DTD v2.3 20070202//EN" uri="book.dtd"/> <public publicId="-//NLM//DTD Book DTD Module of Modules v2.3 20070202//EN" uri="bookcustom-modules.ent"/> <public publicId="-//NLM//DTD NCBI Book DTD Over-ride Classes Module v2.3 20070202//EN" uri="bookcustom-classes.ent"/> <public publicId="-//NLM//DTD NCBI Book DTD Over-ride Mixes Module v2.3 20070202//EN" uri="bookcustom-mixes.ent"/> <public publicId="-//NLM//DTD NCBI Book DTD Content and Attribute Over-ride Module v2.3 20070202//EN" uri="bookcustom-models.ent"/> <public publicId="-//NLM//DTD NCBI Book Image Map Elements v2.3 20070202//EN" uri="bookimagemap.ent"/> <public publicId="-//NLM//DTD NCBI Book DTD Book Metadata Elements v2.3 20070202//EN" uri="bookmeta.ent"/> <public publicId="-//NLM//DTD NCBI Book Multi-link Elements v2.3 20070202//EN" uri="bookmultilink.ent"/> <public publicId="-//NLM//DTD NCBI Book DTD Book Component Metadata Elements v2.3 20070202//EN" uri="bookpart.ent"/> <public publicId="-//NLM//DTD NCBI Book DTD Book Related Object Element v2.3 20070202//EN" uri="bookrelated-object.ent"/> <!-- .............................................................. --> <!-- NCBI BOOK COLLECTION DTD --> <!-- Uses all the book-specific modules above --> <!-- .............................................................. --> <public publicId="-//NLM//DTD NCBI Book Collection DTD v2.3 20070202//EN" uri="bookcollection.dtd"/> <!-- .............................................................. --> <!-- NCBI HISTORICAL BOOK COLLECTION DTD --> <!-- Also uses all the book-specific modules --> <!-- .............................................................. --> <public publicId="-//NLM//DTD NCBI Historical Book DTD v2.3 20070202//EN" uri="historical.dtd"/> <public publicId="-//NLM//DTD NCBI Historical Book DTD Module of Modules v2.3 20070202//EN" uri="historical-modules.ent"/> <public publicId="-//NLM//DTD NCBI Historical Book DTD Over-ride Classes Module v2.3 20070202//EN" uri="historical-classes.ent"/> <public publicId="-//NLM//DTD NCBI Historical Book DTD Over-ride Mixes Module v2.3 20070202//EN" uri="historical-mixes.ent"/> <public publicId="-//NLM//DTD NCBI Historical Book DTD Content and Attribute Over-ride Module v2.3 20070202//EN" uri="historical-models.ent"/> <public publicId="-//NLM//DTD NCBI Historical Book DTD Annotation Elements v2.3 20070202//EN" uri="annotation.ent"/> <public publicId="-//NLM//DTD NCBI Historical Book DTD Metadata Elements v2.3 20070202//EN" uri="historicalmeta.ent"/> </group> <!-- ============================================================== --> <!-- ARCHIVING AND INTERCHANGE DTD SUITE --> <!-- MODULAR LIBRARY --> <!-- ============================================================== --> <group xml:base="file:///C:/Work/Tasks/Common/" prefer="public"> <!-- MODULE OF MODULES --> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Module of Modules v2.3 20070202//EN" uri="modules.ent"/> <!-- CLASSES AND MIXES --> <public publicId="-//NLM//DTD Default Element Classes Module v2.3 20070202//EN" uri="default-classes.ent"/> <public publicId="-//NLM//DTD Default Element Mixes Module v2.3 20070202//EN" uri="default-mixes.ent"/> <!-- ELEMENT COMMON (SHARED) ELEMENTS/CHARACTERS --> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Common (Shared) Elements Module v2.3 20070202//EN" uri="common.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Notation Declarations v2.3 20070202//EN" uri="notat.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite XML Special Characters Module v2.3 20070202//EN" uri="xmlspecchars.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Custom Special Characters Module v2.3 20070202//EN" uri="chars.ent"/> <!-- CLASS MODULES --> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Journal Article Metadata Elements v2.3 20070202//EN" uri="articlemeta.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Back Matter Elements v2.3 20070202//EN" uri="backmatter.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Display Class Elements v2.3 20070202//EN" uri="display.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Formatting Element Classes v2.3 20070202//EN" uri="format.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Journal Metadata Elements v2.3 20070202//EN" uri="journalmeta.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Link Class Elements v2.3 20070202//EN" uri="link.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite List Class Elements v2.3 20070202//EN" uri="list.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Math Class Elements v2.3 20070202//EN" uri="math.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Paragraph-Like Elements v2.3 20070202//EN" uri="para.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Subject Phrase Class Elements v2.3 20070202//EN" uri="phrase.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Bibliographic Reference (Citation) Class Elements v2.3 20070202//EN" uri="references.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite Section Class Elements v2.3 20070202//EN" uri="section.ent"/> <!-- SET UP TABLES --> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite XHTML Table Setup Module v2.3 20070202//EN" uri="XHTMLtablesetup.ent"/> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite OASIS XML Table Setup Module v1.2 20040830//EN" uri="oasis-tablesetup.ent"/> <!-- SET UP MATHML --> <public publicId="-//NLM//DTD Archiving and Interchange DTD Suite MathML Setup Module v2.3 20070202//EN" uri="mathmlsetup.ent"/> </group> <!-- ============================================================= --> <!-- COMMONLY-USED PUBLIC MODELS AND PUBLIC --> <!-- CHARACTER-ENTITY SETS USED IN THE SUITE --> <!-- ============================================================= --> <group xml:base="file:///C:/Work/Entities/" prefer="public"> <!-- .............................................................. --> <!-- TABLES: XHTML TABLE MODULES --> <!-- .............................................................. --> <public publicId="-//W3C//ELEMENTS XHTML Tables 1.0//EN" uri="xhtml-table-1.mod"/> <public publicId="-//W3C//ENTITIES XHTML Inline Style 1.0//EN" uri="xhtml-inlstyle-1.mod"/> <!-- .............................................................. --> <!-- TABLES: OASIS EXCHANGE TABLE MODULES --> <!-- .............................................................. --> <public publicId="-//OASIS//DTD XML Exchange Table Model 19990315//EN" uri="oasis-exchange.ent"/> <!-- .............................................................. --> <!-- MATHML MODULES --> <!-- .............................................................. --> <public publicId="-//W3C//DTD MathML 2.0//EN" uri="mathml2.dtd"/> <public publicId="-//W3C//ENTITIES MathML 2.0 Qualified Names 1.0//EN" uri="mathml2-qname-1.mod"/> <public publicId="-//W3C//ENTITIES Extra for MathML 2.0//EN" uri="mathml/mmlextra.ent"/> <public publicId="-//W3C//ENTITIES Aliases for MathML 2.0//EN" uri="mathml/mmlalias.ent"/> <!-- .............................................................. --> <!-- ISO 8879 ENTITIES --> <!-- .............................................................. --> <public publicId="-//W3C//ENTITIES Box and Line Drawing for MathML 2.0//EN" uri="iso8879/isobox.ent"/> <public publicId="-//W3C//ENTITIES Russian Cyrillic for MathML 2.0//EN" uri="iso8879/isocyr1.ent"/> <public publicId="-//W3C//ENTITIES Non-Russian Cyrillic for MathML 2.0//EN" uri="iso8879/isocyr2.ent"/> <public publicId="-//W3C//ENTITIES Diacritical Marks for MathML 2.0//EN" uri="iso8879/isodia.ent"/> <public publicId="-//W3C//ENTITIES Added Latin 1 for MathML 2.0//EN" uri="iso8879/isolat1.ent"/> <public publicId="-//W3C//ENTITIES Added Latin 2 for MathML 2.0//EN" uri="iso8879/isolat2.ent"/> <public publicId="-//W3C//ENTITIES Numeric and Special Graphic for MathML 2.0//EN" uri="iso8879/isonum.ent"/> <public publicId="-//W3C//ENTITIES Publishing for MathML 2.0//EN" uri="iso8879/isopub.ent"/> <!-- .............................................................. --> <!-- ISO 9573-13 ENTITIES --> <!-- .............................................................. --> <public publicId="-//W3C//ENTITIES General Technical for MathML 2.0//EN" uri="iso9573-13/isotech.ent"/> <public publicId="-//W3C//ENTITIES Greek Symbols for MathML 2.0//EN" uri="iso9573-13/isogrk3.ent"/> <public publicId="-//W3C//ENTITIES Math Alphabets: Script for MathML 2.0//EN" uri="iso9573-13/isomscr.ent"/> <public publicId="-//W3C//ENTITIES Added Math Symbols: Arrow Relations for MathML 2.0//EN" uri="iso9573-13/isoamsa.ent"/> <public publicId="-//W3C//ENTITIES Added Math Symbols: Binary Operators for MathML 2.0//EN" uri="iso9573-13/isoamsb.ent"/> <public publicId="-//W3C//ENTITIES Added Math Symbols: Delimiters for MathML 2.0//EN" uri="iso9573-13/isoamsc.ent"/> <public publicId="-//W3C//ENTITIES Added Math Symbols: Negated Relations for MathML 2.0//EN" uri="iso9573-13/isoamsn.ent"/> <public publicId="-//W3C//ENTITIES Added Math Symbols: Ordinary for MathML 2.0//EN" uri="iso9573-13/isoamso.ent"/> <public publicId="-//W3C//ENTITIES Added Math Symbols: Relations for MathML 2.0//EN" uri="iso9573-13/isoamsr.ent"/> <public publicId="-//W3C//ENTITIES Math Alphabets: Fraktur for MathML 2.0//EN" uri="iso9573-13/isomfrk.ent"/> <public publicId="-//W3C//ENTITIES Math Alphabets: Open Face for MathML 2.0//EN" uri="iso9573-13/isomopf.ent"/> <!-- .............................................................. --> <!-- NON-MATHML ENTITIES(backwards compatibility)--> <!-- .............................................................. --> <public publicId="-//W3C//ENTITIES Greek Letters//EN" uri="xmlchars/isogrk1.ent"/> <public publicId="-//W3C//ENTITIES Monotoniko Greek//EN" uri="xmlchars/isogrk2.ent"/> <public publicId="-//W3C//ENTITIES Alternative Greek Symbols//EN" uri="xmlchars/isogrk4.ent"/> </group> <!-- ============================================================== --> </catalog>