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Romain Loth
<!-- ============================================================= -->
<!-- MODULE: Journal Publishing DTD Customize Content and -->
<!-- Attributes Module -->
<!-- VERSION: 3.0 -->
<!-- DATE: Feb 2008 -->
<!-- -->
<!-- ============================================================= -->
<!-- ============================================================= -->
<!-- PUBLIC DOCUMENT TYPE DEFINITION -->
<!-- TYPICAL INVOCATION -->
<!--
"-//NLM//DTD Journal Publishing DTD Customize Content and Attributes Module v3.0 20080202//EN"
Delivered as file "journalpubcustom-models3.ent" -->
<!-- ============================================================= -->
<!-- ============================================================= -->
<!-- SYSTEM: Journal Publishing DTD of the -->
<!-- Archiving and Interchange DTD Suite -->
<!-- -->
<!-- PURPOSE: To declare the Parameter Entities (PEs) used to -->
<!-- over-ride content models or parts of content -->
<!-- models when making a new DTD from the modules of -->
<!-- the Archiving and Interchange DTD Suite. -->
<!-- -->
<!-- Or-groups within models should use mixes or -->
<!-- classes rather than name elements directly. -->
<!-- -->
<!-- Note: Since PEs must be declared before they -->
<!-- are used, this module must be called before the -->
<!-- content modules that declare elements. -->
<!-- -->
<!-- CONTAINS: 1) PEs that define OR lists of elements to be -->
<!-- mixed with #PCDATA in element content models -->
<!-- (all PEs are named "yyy-elements", where "yyy" -->
<!-- is the name of the primary element whose -->
<!-- content model will use the declared PE.) -->
<!-- 2) PEs that define complete content models. -->
<!-- (names ending in the suffix "-model") -->
<!-- 3) PEs that define attribute list or attribute -->
<!-- value over-rides -->
<!-- -->
<!-- CREATED FOR: -->
<!-- Digital Archive of Journal Articles -->
<!-- National Center for Biotechnology Information -->
<!-- (NCBI) -->
<!-- National Library of Medicine (NLM) -->
<!-- -->
<!-- ORIGINAL CREATION DATE: -->
<!-- September 2004 -->
<!-- -->
<!-- CREATED BY: Deborah Lapeyre (Mulberry Technologies, Inc.) -->
<!-- B. Tommie Usdin (Mulberry Technologies, Inc.) -->
<!-- -->
<!-- Suggestions for refinements and enhancements to -->
<!-- this DTD should be sent in email to: -->
<!-- archive-dtd@ncbi.nlm.nih.gov -->
<!-- ============================================================= -->
<!-- ============================================================= -->
<!-- DTD VERSION/CHANGE HISTORY -->
<!-- ============================================================= -->
<!--
Version Reason/Occasion (who) vx.x (yyyy-mm-dd)
=============================================================
Version 3.0 (DAL/BTU) v3.0 (2007-10-31)
Version 3.0 is the first non-backward-compatible release.
In addition to the usual incremental changes, some
elements and attributes have been renamed and/or remodeled
to better meet user needs and to increase tag set consistency.
All module change histories are available through the Tag Suite
web site at http://dtd.nlm.nih.gov.
Details on version 3.0 are available at
http://dtd.nlm.nih.gov/3.0.
1. Updated public identifier to "v3.0 20080202//EN" -->
<!-- ============================================================= -->
<!-- INLINE MIXES TO OVER-RIDE CONTENT MODELS -->
<!-- (ELEMENTS TO BE ADDED TO #PCDATA IN MODELS)-->
<!-- ============================================================= -->
<!-- ABBREVIATED JOURNAL TITLE ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <abbrev-journal-title>
Removed the face markup, %just-rendition; -->
<!ENTITY % abbrev-journal-title-elements
"" >
<!-- CONFERENCE ACRONYM ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
the conference acronym.
Removed %simple-text; -->
<!ENTITY % conf-acronym-elements
"" >
<!-- CONFERENCE LOCATION ELEMENTS -->
<!-- Elements for use in the <conf-loc> element
Removed %simple-text; -->
<!ENTITY % conf-loc-elements
"" >
<!-- CONFERENCE NAME ELEMENTS -->
<!-- Elements for use in the <conf-name> element.
Removed %simple-text; -->
<!ENTITY % conf-name-elements
"" >
<!-- CONFERENCE NUMBER ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
the conference number.
Removed %simple-text; -->
<!ENTITY % conf-num-elements
"" >
<!-- CONFERENCE SPONSOR ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
the conference sponsor.
Removed %simple-text; -->
<!ENTITY % conf-sponsor-elements
"" >
<!-- DEGREE(S) ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
<degrees>
Removed %just-rendition; -->
<!ENTITY % degrees-elements
"" >
<!-- EDITION ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
Removed %just-rendition; -->
<!ENTITY % edition-elements
"" >
<!-- FAX NUMBER ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <fax>
Removed %just-rendition; -->
<!ENTITY % fax-elements
"" >
<!-- GIVEN (FIRST) NAMES ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <given-names>
Removed %just-rendition; -->
<!ENTITY % given-names-elements
"" >
<!-- INSTITUTION NAME ELEMENTS -->
<!-- Elements for use in the <institution>
element
Removed %break.class; and %emphasis.class; -->
<!ENTITY % institution-elements
"| %subsup.class;" >
<!-- ISSUE TITLE ELEMENTS -->
<!-- Elements for use with data characters inside
the model for the <issue> element
Removed %just-rendition; -->
<!ENTITY % issue-elements
"" >
<!-- JOURNAL TITLE ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <journal-title>
Removed %just-rendition; -->
<!ENTITY % journal-title-elements
"" >
<!-- KEYWORD CONTENT ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a keyword <kwd>. -->
<!ENTITY % kwd-elements
"| %emphasis.class; | %phrase-content.class; |
%subsup.class;" >
<!-- PATENT NUMBER ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
<patent>
Removed %just-rendition; -->
<!ENTITY % patent-elements
"" >
<!-- PHONE NUMBER ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <phone number>
Removed %just-rendition; -->
<!ENTITY % phone-elements
"" >
<!-- PREFIX ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <prefix>
Removed %just-rendition; -->
<!ENTITY % prefix-elements
"" >
<!-- PREFORMATTED TEXT ELEMENTS -->
<!-- Elements that may be used, along with data
characters, inside the content model for the
<preformat> element, in which white space,
such as tabs, line feeds, and spaces will
be preserved -->
<!ENTITY % preformat-elements
"| %address-link.class; |
%display-back-matter.class; |
%emphasis.class; | %phrase.class; |
%subsup.class;" >
<!-- PUBLISHER'S LOCATION ELEMENTS -->
<!-- Elements for use in the Publisher Location
<publisher-loc> element
Removed %address.class;, %address-link.class;,
%emphasis.class;, and %subsup.class; -->
<!ENTITY % publisher-loc-elements
"| %address-link.class;" >
<!-- PUBLISHER'S NAME ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <publisher-name>
Removed %just-rendition; -->
<!ENTITY % publisher-name-elements
"" >
<!-- SUFFIX ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <suffix>
Removed %just-rendition; -->
<!ENTITY % suffix-elements
"" >
<!-- SURNAME ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <surname>
Removed %just-rendition; -->
<!ENTITY % surname-elements
"" >
<!-- URI ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <uri>
Removed %just-rendition; -->
<!ENTITY % uri-elements
"" >
<!-- VOLUME NUMBER ELEMENTS -->
<!-- The elements that can be included along with
data characters inside the content model of
a <volume>
Removed %just-rendition; -->
<!ENTITY % volume-elements
"" >
<!-- ============================================================= -->
<!-- OVER-RIDES OF CONTENT MODELS (FULL MODELS) -->
<!-- ============================================================= -->
<!-- ABSTRACT MODEL -->
<!-- Abstracts may contain one or more paragraphs
(as a typical abstract does) or titled
sections, as is done in many physics
articles.
Unlike the default model in the base DTD
Suite, this <abstract> requires that all
sections in the abstract start with titles.-->
<!ENTITY % abstract-model
"(label?, title?, p*, sec*)" >
<!-- ACKNOWLEDGMENTS MODEL -->
<!-- Content model for the <ack> element -->
<!ENTITY % ack-model "(label?, title?, p*, sec*, ref-list*)" >
<!-- ANONYMOUS MODEL -->
<!-- Unlike in Green, <anonymous> is empty. When
present, it is used to generate the text
"anonymous" or "anon.", etc. -->
<!ENTITY % anonymous-model
"EMPTY" >
<!-- ARRAY CONTENT MODEL -->
<!-- The element used to contain material in
rows and columns that is just a block insert
into the text flow, not numbered or called a
table, and not titled or captioned -->
<!ENTITY % array-model "((%access.class; | %address-link.class;)*,
( (%just-base-display.class;)* |
%tbody.class; ),
(%display-back-matter.class;)* )" >
<!-- ARTICLE METADATA MODEL -->
<!-- Full content model for the metadata that is
specific to the article.
Unlike in Archive DTD, some of the metadata
is required here. -->
<!ENTITY % article-meta-model
"(article-id*, article-categories?,
title-group, (contrib-group | aff)*,
author-notes?, pub-date+,
volume?, volume-id*, volume-series?,
issue?, issue-id*, issue-title*,
issue-sponsor*, issue-part?, isbn*,
supplement?,
((fpage, lpage?, page-range?) |
elocation-id)?,
(%address-link.class; | product |
supplementary-material)*, history?,
permissions?, self-uri*, related-article*,
abstract*, trans-abstract*, kwd-group*,
funding-group*, conference*, counts?,
custom-meta-group?)" >
<!-- CONFERENCE MODEL -->
<!-- The content model of the <conference>
element -->
<!ENTITY % conference-model
"(conf-date, (conf-name | conf-acronym )+,
conf-num?, conf-loc?, conf-sponsor*,
conf-theme?)" >
<!-- CONTRIBUTOR MODEL -->
<!-- Content model for the <contrib> element -->
<!ENTITY % contrib-model
"((%name.class;)*, (%degree.class;)*,
(%contrib-info.class;)* )" >
<!-- DATE ELEMENTS MODEL -->
<!-- The content models for elements that describe
dates, such as Publication Date <pub-date> and
History Dates <date>. The <string-date>
element holds dates for which months and
years are not given, for example "first
quarter", "spring", etc.
Unlike the base DTD Suite, this <date>
requires a <year> and may not take a string
date as an alternative. -->
<!ENTITY % date-model "(((day?, month?) | season)?, year)" >
<!-- DEFINITION LIST: DEFINITION ITEM ELEMENTS -->
<!-- The content model of a <def-item>. -->
<!ENTITY % def-item-model
"(term, def*)" >
<!-- FIGURE-LIKE CONTENT MODEL -->
<!-- Content model for the Figure element and any
similarly structured elements
Made <label> and <caption> non-repeatable. -->
<!ENTITY % fig-model "((%id.class;)*, label?, (%caption.class;)?,
(%access.class; | %address-link.class;)*,
(%block-math.class; |
%chem-struct-wrap.class; |
%intable-para.class; |
%just-table.class; | %just-para.class; |
%list.class; | %simple-display.class;)*,
(%display-back-matter.class;)* )" >
<!-- FIGURE GROUP MODEL -->
<!-- Content model for a <fig-group> -->
<!ENTITY % fig-group-model
"((%caption.class;)?,
(%access.class; | %address-link.class;)*,
(%fig-display.class; |
%just-base-display.class;)* )" >
<!-- JOURNAL METADATA MODEL -->
<!-- Content model for the journal metadata
element <journal-meta> -->
<!ENTITY % journal-meta-model
"(journal-id+, journal-title-group*,
issn+, isbn*, publisher?, notes?)" >
<!-- LIST MODEL -->
<!-- Content model for the <list> element -->
<!ENTITY % list-model "(label?, title?, list-item+)" >
<!-- PERSON GROUP MODEL -->
<!-- Content model for the Person Group element -->
<!ENTITY % person-group-model
"(%name.class; | %person-group-info.class; |
%string-name.class;)*" >
<!-- REFERENCE ITEM MODEL -->
<!-- Content model for the <ref> element -->
<!ENTITY % ref-model "(label?,
(%citation.class; | %note.class;)+ )" >
<!-- CONTENT MODEL FOR A STRUCTURAL SECTION -->
<!-- The model for a section that requires that a
either <title> or a <label> (which in some
journals takes the place of a title) must be
present. One or the other must be present
for autogeneration of a Table of Contents or
other navigation. -->
<!ENTITY % sec-model "(sec-meta?, ( (label, title?) | title ),
(%para-level;)*,
(%sec-level;)*,
(%sec-back-matter-mix;)* )" >
<!-- TRANSLATED ABSTRACT MODEL -->
<!-- Content model for an <trans-abstract>
element -->
<!ENTITY % trans-abstract-model
"(label?, title?, p*, sec*)" >
<!-- ============================================================= -->
<!-- DUPLICATE ATTRIBUTE DECLARATIONS -->
<!-- (These are unchanged from the base Suite, -->
<!-- but are used in attribute over-rides below)-->
<!-- ============================================================= -->
<!-- DISPLAY ATTRIBUTES OPTIONAL ID -->
<!ENTITY % display-atts
"position (anchor | float | margin) 'float'
orientation
(portrait | landscape) 'portrait'" >
<!-- XLINK LINK ATTRIBUTES -->
<!-- Attributes for any element that must be a
link -->
<!ENTITY % link-atts
"xmlns:xlink CDATA #FIXED
'http://www.w3.org/1999/xlink'
xlink:type (simple) #FIXED 'simple'
xlink:href CDATA #REQUIRED
xlink:role CDATA #IMPLIED
xlink:title CDATA #IMPLIED
xlink:show (embed | new | none | other | replace)
#IMPLIED
xlink:actuate
(none | onLoad | onRequest | other)
#IMPLIED" >
<!-- MIGHT LINK XLINK ATTRIBUTES -->
<!-- Attributes for any element that may be a link
but need not be one -->
<!ENTITY % might-link-atts
"xmlns:xlink CDATA #FIXED
'http://www.w3.org/1999/xlink'
xlink:type (simple) #FIXED 'simple'
xlink:href CDATA #IMPLIED
xlink:role CDATA #IMPLIED
xlink:title CDATA #IMPLIED
xlink:show (embed | new | none | other | replace)
#IMPLIED
xlink:actuate
(none | onLoad | onRequest | other)
#IMPLIED" >
<!-- ============================================================= -->
<!-- OVER-RIDES OF ATTRIBUTE LISTS -->
<!-- ============================================================= -->
<!-- FOOTNOTE TYPE VALUES -->
<!-- Used to mark the semantics of the footnote,
what information does this footnote convey.
-->
<!ENTITY % fn-types "abbr | com | con | conflict |
corresp | current-aff | deceased |
edited-by | equal |
financial-disclosure | on-leave |
participating-researchers |
presented-at | presented-by |
present-address | previously-at |
study-group-members |
supplementary-material |
supported-by | other" >
<!-- FOOTNOTE ATTRIBUTES -->
<!-- Attribute list for Footnote element
Unlike base, "fn-type" values have been made
explicit and removed the symbol attribute -->
<!ENTITY % fn-atts
"id ID #IMPLIED
fn-type (%fn-types;) #IMPLIED
symbol CDATA #IMPLIED
xml:lang NMTOKEN #IMPLIED" >
<!-- GIVEN NAMES ATTRIBUTES -->
<!-- Removed the "initial" attribute for the given
name, that held initials for those cases in
which they could not be algorithmically
determined. -->
<!ENTITY % given-names-atts
"" >
<!-- SURNAME ATTRIBUTES -->
<!-- Removed the initial(s) for the surname of
the person. Particularly useful in those
cases that cannot be algorithmically
determined. -->
<!ENTITY % surname-atts
"" >
<!-- INLINE GRAPHIC ATTRIBUTES -->
<!-- Attributes for Inline Graphic
<inline-graphic> -->
<!ENTITY % inline-graphic-atts
"id ID #IMPLIED
content-type
CDATA #IMPLIED
baseline-shift
CDATA #IMPLIED
mimetype CDATA #IMPLIED
mime-subtype
CDATA #IMPLIED
%link-atts;" >
<!-- PERSON GROUP ATTRIBUTES -->
<!-- Attributes for the <person-group> element -->
<!ENTITY % person-group-atts
"id ID #IMPLIED
person-group-type
(allauthors | assignee | author | compiler |
director | editor | guest-editor | inventor |
translator | transed) #IMPLIED" >
<!-- SECTION ATTRIBUTES -->
<!-- Attribute list for Section element -->
<!ENTITY % sec-atts
"id ID #IMPLIED
xml:lang NMTOKEN #IMPLIED
sec-type CDATA #IMPLIED
specific-use
CDATA #IMPLIED" >
<!-- ================== End Publishing Content/ATT Override ====== -->